Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015823099.1_cds_XP_016501381.1_15117
CDS Infomation

[gene=LOC107819748] [db_xref=GeneID:107819748] [protein=pentatricopeptide repeat-containing protein At2g17033-like] [protein_id=XP_016501381.1] [location=complement(join(22810..23892,24373..24657))] [gbkey=CDS]
Sequence

ATGATCGGAAGTATCCTAGTTCCGGCGCCGTTGACGCTGCCACTTCACCGGATAAGCCTC
TGGAACCGTCACGCACAGTCAGGTAGTCCTCGTTGCTCATTAAGCAAACAAGGCCACCGC
TTTATCTCCACCCTTATCGCCACCGATTCCGACGATATATCCGCTACTCACCGCTTGCTA
CGGAAATTCGTCGCTTCTTCTTCAAAACACGTTGCTCTCAGTACTCTATCTCAGCTCCTA
TCTCCTACTACCTCTAACCTTCGCCTCTCTTCTCTTGCCCTCCCCTTGTATTTGGAAATC
AGTGAAGCGTCATGGTTTGATTGGAATTCGAAACTAGTGGCTGACTTGGTTGCATTGCTT
TACAAGCTAGAGAGATTTGATGAAGCTGAAACCCTAGTTACTGAAACGGTTTCTAAATTG
GGAAGCCGAGAACGAGATTTGTGTAGTTTCTACTCTCAGTTGATTCATTCACTATCTAAG
CAAAAATCGGAGAGAGGAGTTTTGAATTTTGTTACAAAATTGAAGCAGGTTATCTTGTGT
TCGTCGTCTGTTTATTTGAAGCAACAAGGGTATGCCTCGATGGTGGATGCATTTTGTTCT
ATTGGATTACCGCGTGAAGCTGAGGAATTCATGGAAGAGATGAAGGAATTAGGATTGAAA
TTATCAAAGTTTGAATTTAGAGCTCTAGTTTACTCATATGGGAAATCAGGATGCTTTAGC
GAAATGAAAAGGATTGTTGGTCAAATGGATGGTCTGGGACTTAAATTAGATACAGTTGGT
GCGAATATGGTGCTTAATTCATTTGGATCTCAGTACGAGCTTTCAGAAATGGTGTCGTGG
CTCCGAAAAATGAAAGCTTCAGATGTTCCATTTTCTATCAGGACTTACAATTCGGTGTTG
AATTCATGCCCCACGATTAGTCATTTGCTGCAAGATCCAAAGAGTCTTCCTCTTTCTCTG
GAAGAGTTAATGGGCAATCTGAATGAGAATGAAGCTGGTTTGGTGAAGATACTGGTTGGC
TCATCGGTTTTGGAGGAAACAATGCAGTGGAACCCTTCAGAGTTGAAGCTGGACTTGCAT
GGGATGCATTTGAGCTCTGCTTATGTGGTCATATTACAATGGTTTCATCAGCTTCAATGC
AAGCTTGTTGCTGAAAATCGCGTTCTTCCTGCGGAAATCACAGTGGTATGTGGGACGGGA
AAACACAGTGTTGTTAGAGGAGAATCCCCTGTGAAAGGGTTGATCAAGGAAATACTGCTA
CGGGTGGGATGTCCACTCAGGATTGATAGGAAGAACATTGGATGTTTCATTGGTAAAGGA
AAAAATTTCATGGAGTGGTTATCAAGTTACAATGCCACTTATACATGA

Peptide Sequence

PEP ID

XP_016501381.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At2g17033-like [Nicotiana tabacum]
Sequence

MIGSILVPAPLTLPLHRISLWNRHAQSGSPRCSLSKQGHRFISTLIATDSDDISATHRLL
RKFVASSSKHVALSTLSQLLSPTTSNLRLSSLALPLYLEISEASWFDWNSKLVADLVALL
YKLERFDEAETLVTETVSKLGSRERDLCSFYSQLIHSLSKQKSERGVLNFVTKLKQVILC
SSSVYLKQQGYASMVDAFCSIGLPREAEEFMEEMKELGLKLSKFEFRALVYSYGKSGCFS
EMKRIVGQMDGLGLKLDTVGANMVLNSFGSQYELSEMVSWLRKMKASDVPFSIRTYNSVL
NSCPTISHLLQDPKSLPLSLEELMGNLNENEAGLVKILVGSSVLEETMQWNPSELKLDLH
GMHLSSAYVVILQWFHQLQCKLVAENRVLPAEITVVCGTGKHSVVRGESPVKGLIKEILL
RVGCPLRIDRKNIGCFIGKGKNFMEWLSSYNATYT

Transcript Sequence

Gene sequence data has not been registered.